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  5. Seita.3G113000.1

Seita.3G113000.1


Description : Unknown function


Gene families : OG_42_0002093 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G113000.1
Cluster HCAA Clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
At1g17620 No alias At1g17620/F11A6_23 [Source:UniProtKB/TrEMBL;Acc:Q9LNP3] 0.05 Orthogroups_2024-Update
Bradi2g41640 No alias Function unknown 0.03 Orthogroups_2024-Update
GRMZM2G096655 No alias Function unknown 0.02 Orthogroups_2024-Update
Potri.018G052500 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.5G207900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc11g069970 No alias LOW QUALITY:Late embryogenesis abundant (LEA)... 0.03 Orthogroups_2024-Update
Solyc12g095980 No alias LOW QUALITY:Late embryogenesis abundant (LEA)... 0.03 Orthogroups_2024-Update
Sopen08g018700 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 125 226
No external refs found!