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  5. Seita.3G113800.1

Seita.3G113800.1


Description : B-G-class Rab-GDF protein


Gene families : OG_42_0000375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G113800.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
At1g08770 No alias PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3] 0.03 Orthogroups_2024-Update
At1g17700 No alias PRA1 family protein F1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ63] 0.02 Orthogroups_2024-Update
Brara.C00019.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
Potri.008G074000 No alias prenylated RAB acceptor 1.B4 0.02 Orthogroups_2024-Update
Sobic.003G341600.1 No alias B-G-class Rab-GDF protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 40 183
No external refs found!