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  5. Seita.3G116900.1

Seita.3G116900.1


Description : Unknown function


Gene families : OG_42_0000058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G116900.1
Cluster HCAA Clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Bradi1g48595 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi1g57831 No alias RNA-directed DNA polymerase (reverse... 0.03 Orthogroups_2024-Update
Bradi2g13163 No alias Function unknown 0.04 Orthogroups_2024-Update
Bradi2g18451 No alias Ribonuclease H-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g14685 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi4g14692 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi5g03559 No alias RNA-directed DNA polymerase (reverse... 0.02 Orthogroups_2024-Update
Glyma.17G232230 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU1Hr1G036590.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU1Hr1G055080.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G023890.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G072510.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G006580.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G041190.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G061250.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G034610.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G001830.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G034900.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G078600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G106390.9 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G047590.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G051380.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G075450.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G051770.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G062780.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G082610.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g05780 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os02g34740 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g14930 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Seita.1G171600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G326300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G123500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G161900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G349400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G101000.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.8G125100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G135500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G363800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.002G026000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G139050.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!