Seita.3G118300.1

Description : Unknown function

Gene families : OG_42_0001521 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001521_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.3G118300.1

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g19332	No alias	UB-like protease 1A	0.03	Orthogroups_2024-Update
Bradi1g24421	No alias	Function unknown	0.04	Orthogroups_2024-Update
Bradi1g49296	No alias	Function unknown	0.03	Orthogroups_2024-Update
Bradi2g24252	No alias	Function unknown	0.02	Orthogroups_2024-Update
HORVU2Hr1G033300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU4Hr1G029140.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.1G047200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.4G141000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.4G149900.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.9G083800.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Seita.9G279500.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.009G245200.2	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	16Dec
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	16Dec
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000347	THO complex	IEP	Predicted GO
CC	GO:0000445	THO complex part of transcription export complex	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
BP	GO:0009116	nucleoside metabolic process	IEP	Predicted GO
BP	GO:0019321	pentose metabolic process	IEP	Predicted GO
BP	GO:0019566	arabinose metabolic process	IEP	Predicted GO
BP	GO:0046373	L-arabinose metabolic process	IEP	Predicted GO
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Predicted GO
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003653	Peptidase_C48_C	41	207

External Links

No external refs found!