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  5. Seita.3G119000.1

Seita.3G119000.1


Description : Unknown function


Gene families : OG_42_0000589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000589_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G119000.1
Cluster HCAA Clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Brara.I04573.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G026250.3 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10434775g0010 No alias (at1g09880 : 299.0) Rhamnogalacturonate lyase family... 0.02 Orthogroups_2024-Update
MA_228529g0010 No alias (at1g09890 : 192.0) Rhamnogalacturonate lyase family... 0.02 Orthogroups_2024-Update
Seita.6G247100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G173300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc04g014450 No alias No description available 0.02 Orthogroups_2024-Update
Solyc04g076630 No alias Rhamnogalacturonate lyase family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen04g006570 No alias Rhamnogalacturonate lyase family 0.02 Orthogroups_2024-Update
Sopen04g030360 No alias Rhamnogalacturonate lyase family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR029413 RG-lyase_II 415 482
IPR029411 RG-lyase_III 499 696
IPR010325 Rhamnogal_lyase 55 254
No external refs found!