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  5. Seita.3G125200.1

Seita.3G125200.1


Description : Unknown function


Gene families : OG_42_0004630 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004630_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G125200.1
Cluster HCAA Clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Bradi2g05242 No alias Function unknown 0.07 Orthogroups_2024-Update
Glyma.05G185300 No alias Function unknown 0.05 Orthogroups_2024-Update
HORVU3Hr1G021050.13 No alias Unknown function 0.08 Orthogroups_2024-Update
MA_646g0010 No alias (at4g39420 : 917.0) unknown protein; INVOLVED IN:... 0.05 Orthogroups_2024-Update
PSME_00001703-RA No alias (at4g39420 : 1321.0) unknown protein; INVOLVED IN:... 0.05 Orthogroups_2024-Update
Pp1s452_2V6 No alias F23K16.70; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR028107 Spatacsin_C_dom 2735 3026
No external refs found!