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  5. Seita.3G126400.1

Seita.3G126400.1


Description : clade F phosphatase


Gene families : OG_42_0000194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G126400.1
Cluster HCAA Clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
178013 No alias HOPW1-1-interacting 2 0.03 Orthogroups_2024-Update
A4A49_17368 No alias putative protein phosphatase 2c 76 0.03 Orthogroups_2024-Update
HORVU2Hr1G048070.2 No alias clade F phosphatase 0.03 Orthogroups_2024-Update
PSME_00042794-RA No alias (at5g53140 : 189.0) Protein phosphatase 2C family... 0.05 Orthogroups_2024-Update
Pp1s174_123V6 No alias protein phosphatase 2c 0.02 Orthogroups_2024-Update
evm.model.tig00000704.67 No alias (at3g51470 : 132.0) Protein phosphatase 2C family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 232 470
No external refs found!