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  5. Seita.3G128100.1

Seita.3G128100.1


Description : bHLH-type transcription factor


Gene families : OG_42_0000286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G128100.1
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_05710 No alias transcription factor bhlh96 0.02 Orthogroups_2024-Update
Bradi3g52150 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.B01465.1 No alias regulatory protein *(SPCH) of asymmetric cell division &... 0.03 Orthogroups_2024-Update
GRMZM2G064638 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G082586 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.04G098400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G125500 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G231800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G078270.2 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g52190 No alias helix-loop-helix DNA-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g03000 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g23050 No alias helix-loop-helix DNA-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00017392-RA No alias (at1g72210 : 165.0) basic helix-loop-helix (bHLH)... 0.04 Orthogroups_2024-Update
Potri.007G097600 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G202900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G054500 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G327200.1 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
Solyc01g098720 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily... 0.04 Orthogroups_2024-Update
Solyc11g010340 No alias bHLH transcription factor 069 0.04 Orthogroups_2024-Update
Sopen11g005120 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 192 243
No external refs found!