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  5. Seita.3G135200.1

Seita.3G135200.1


Description : Unknown function


Gene families : OG_42_0000451 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000451_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G135200.1
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Bradi2g42637 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Orthogroups_2024-Update
Bradi3g55740 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g25670 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os01g41340 No alias OsFBL1 - F-box domain and LRR containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g50990 No alias FBD domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g08160 No alias OsFBD6 - F-box and FBD domain containing protein, expressed 0.01 Orthogroups_2024-Update
Seita.2G022300.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.4G146800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.5G213300.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.5G214500.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G207400.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 95 131
IPR006566 FBD 424 468
No external refs found!