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  5. Seita.3G136600.1

Seita.3G136600.1


Description : Unknown function


Gene families : OG_42_0000476 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000476_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G136600.1
Cluster HCAA Clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
A4A49_01911 No alias putative 2-oxoglutarate-dependent dioxygenase aop1 0.02 Orthogroups_2024-Update
A4A49_10686 No alias putative 2-oxoglutarate-dependent dioxygenase aop1.2 0.03 Orthogroups_2024-Update
At4g03070 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1... 0.03 Orthogroups_2024-Update
Bradi3g35910 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Orthogroups_2024-Update
Brara.E02584.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.08G208433 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
LOC_Os08g32170 No alias oxidoreductase, 2OG-FeII oxygenase domain containing... 0.03 Orthogroups_2024-Update
Potri.018G033400 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
Sobic.009G241700.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc01g006610 No alias 2-oxoglutarate-dependent dioxygenase-related family... 0.02 Orthogroups_2024-Update
Solyc04g053050 No alias 2-oxoglutarate-dependent dioxygenase-related family... 0.03 Orthogroups_2024-Update
Sopen02g013450 No alias 2OG-Fe(II) oxygenase superfamily 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
BP GO:0030638 polyketide metabolic process IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!