Seita.3G147000.1

Description : ARF-type transcription factor

Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.3G147000.1
Cluster	HCAA Clusters: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
A4A49_41656	No alias	auxin response factor 9	0.03	Orthogroups_2024-Update
At1g59750	No alias	Auxin response factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7G0]	0.02	Orthogroups_2024-Update
At2g33860	No alias	Auxin response factor 3 [Source:UniProtKB/Swiss-Prot;Acc:O23661]	0.03	Orthogroups_2024-Update
Bradi1g32547	No alias	auxin response factor 6	0.03	Orthogroups_2024-Update
Bradi1g46602	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Bradi2g08120	No alias	auxin response factor 11	0.02	Orthogroups_2024-Update
Bradi3g03407	No alias	Transcriptional factor B3 family protein /...	0.02	Orthogroups_2024-Update
Brara.D00084.1	No alias	ARF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G01136.1	No alias	ARF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G02126.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G02608.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00676.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G160005	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Glyma.01G002100	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Glyma.07G130400	No alias	Transcriptional factor B3 family protein /...	0.04	Orthogroups_2024-Update
Glyma.08G100100	No alias	auxin response factor 8	0.02	Orthogroups_2024-Update
Glyma.12G076200	No alias	auxin response factor 10	0.03	Orthogroups_2024-Update
Glyma.12G174100	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
Glyma.13G112600	No alias	Transcriptional factor B3 family protein /...	0.04	Orthogroups_2024-Update
Glyma.13G221400	No alias	auxin response factor 8	0.03	Orthogroups_2024-Update
Glyma.13G234200	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Glyma.13G325200	No alias	auxin response factor 10	0.03	Orthogroups_2024-Update
Glyma.17G047100	No alias	Transcriptional factor B3 family protein /...	0.05	Orthogroups_2024-Update
Glyma.18G046800	No alias	auxin response factor 8	0.02	Orthogroups_2024-Update
LOC_Os02g04810	No alias	auxin response factor 5, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g09660	No alias	auxin response factor, putative, expressed	0.06	Orthogroups_2024-Update
Mp1g07070.1	No alias	transcription factor (ARF)	0.02	Orthogroups_2024-Update
Mp1g12750.1	No alias	transcription factor (ARF)	0.02	Orthogroups_2024-Update
Pp1s64_138V6	No alias	arf1-binding protein	0.02	Orthogroups_2024-Update
Pp1s86_1V6	No alias	auxin response	0.02	Orthogroups_2024-Update
Sobic.006G262100.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G196900.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G073600.1	No alias	ARF-type transcription factor & auxin signal mediator...	0.02	Orthogroups_2024-Update
Sopen02g011920	No alias	Auxin response factor	0.02	Orthogroups_2024-Update
Sopen04g034850	No alias	Auxin response factor	0.03	Orthogroups_2024-Update
Sopen08g004260	No alias	Auxin response factor	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	16Dec
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
CC	GO:0005576	extracellular region	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
CC	GO:0005886	plasma membrane	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	35	136
IPR010525	Auxin_resp	161	241

External Links

No external refs found!

Seita.3G147000.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation