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  5. Seita.3G149400.1

Seita.3G149400.1


Description : transcriptional repressor *(IAA/AUX)


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G149400.1
Cluster HCAA Clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Brara.F02766.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Brara.J00231.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Glyma.03G167400 No alias auxin-induced protein 13 0.03 Orthogroups_2024-Update
HORVU3Hr1G031460.3 No alias transcriptional repressor *(IAA/AUX) 0.04 Orthogroups_2024-Update
MA_10431093g0030 No alias (p0c132|iaa30_orysa : 229.0) Auxin-responsive protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 39 264
No external refs found!