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  5. Seita.3G150400.1

Seita.3G150400.1


Description : E2 ubiquitin-conjugating protein *(PHO2)


Gene families : OG_42_0000441 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000441_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G150400.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G277400 No alias ubiquitin-conjugating enzyme 25 0.04 Orthogroups_2024-Update
HORVU3Hr1G004520.12 No alias E2 ubiquitin-conjugating protein *(PHO2) 0.03 Orthogroups_2024-Update
Seita.5G006600.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 636 766
No external refs found!