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  5. Seita.3G154700.1

Seita.3G154700.1


Description : MYB class-R2R3 subgroup-14 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G154700.1
Cluster HCAA Clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
At5g35550 No alias Duplicated homeodomain-like superfamily protein... 0.03 Orthogroups_2024-Update
At5g65790 No alias At5g65790 [Source:UniProtKB/TrEMBL;Acc:O49538] 0.04 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.04 Orthogroups_2024-Update
Brara.D01882.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.G00616.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Brara.J02324.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G050305 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
HORVU1Hr1G008810.3 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G054420.3 No alias MYB class-R2R3 subgroup-7 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g38210 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g05520 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.02 Orthogroups_2024-Update
Potri.006G221200 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.04 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
Seita.5G034500.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.06 Orthogroups_2024-Update
Sobic.004G248700.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Sobic.005G217200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G177100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sopen10g001230 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 62
IPR001005 SANT/Myb 70 111
No external refs found!