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  5. Seita.3G158100.1

Seita.3G158100.1


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G158100.1

Target Alias Description ECC score Gene Family Method Actions
Bradi2g00156 No alias Function unknown 0.03 Orthogroups_2024-Update
Brara.F00132.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Glyma.12G158460 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Solyc07g062720 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G53190.2) 0.02 Orthogroups_2024-Update
Sopen12g028810 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 317 359
No external refs found!