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- Species
- Setaria italica
- Sequence
- Seita.3G159900.1
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Seita.3G159900.1
Description : subfamily ABCB transporter
Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
Type Description Actions Neighborhood Setaria italica: Seita.3G159900.1 Cluster HCAA Clusters: Cluster_246
Expression Context Conservation (ECC)
Target Alias Description ECC score Gene Family Method Actions 123915 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update 408755 No alias P-glycoprotein 18 0.03 Orthogroups_2024-Update At3g28345 No alias ABC transporter B family member 15... 0.03 Orthogroups_2024-Update Cre17.g725150 No alias P-glycoprotein 21 0.02 Orthogroups_2024-Update Mp2g02910.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Orthogroups_2024-Update Pp1s30_121V6 No alias multidrug pheromone mdr abc transporter family 0.03 Orthogroups_2024-Update Sobic.006G123100.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Functional Annotation
Type GO Term Name Evidence Source MF GO:0000166 nucleotide binding None Extended MF GO:0003674 molecular_function None Extended MF GO:0005488 binding None Extended MF GO:0005524 ATP binding IEA 16Dec CC GO:0005575 cellular_component None Extended BP GO:0006810 transport None Extended MF GO:0008144 drug binding None Extended BP GO:0008150 biological_process None Extended CC GO:0016020 membrane IEA 16Dec MF GO:0017076 purine nucleotide binding None Extended MF GO:0030554 adenyl nucleotide binding None Extended MF GO:0032553 ribonucleotide binding None Extended MF GO:0032555 purine ribonucleotide binding None Extended MF GO:0032559 adenyl ribonucleotide binding None Extended MF GO:0035639 purine ribonucleoside triphosphate binding None Extended MF GO:0036094 small molecule binding None Extended MF GO:0043167 ion binding None Extended MF GO:0043168 anion binding None Extended BP GO:0051179 localization None Extended BP GO:0051234 establishment of localization None Extended BP GO:0055085 transmembrane transport IEA 16Dec MF GO:0097159 organic cyclic compound binding None Extended MF GO:0097367 carbohydrate derivative binding None Extended MF GO:1901265 nucleoside phosphate binding None Extended MF GO:1901363 heterocyclic compound binding None Extended Type GO Term Name Evidence Source BP GO:0005975 carbohydrate metabolic process IEP Predicted GO External LinksNo external refs found! Loading ... please wait ...