Seita.3G163700.1

Description : chaperone *(Hsp60)

Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.3G163700.1
Cluster	HCAA Clusters: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method
168153	No alias	chaperonin 60 beta	0.02	Orthogroups_2024-Update
At2g28000	No alias	SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]	0.03	Orthogroups_2024-Update
At3g13470	No alias	Chaperonin 60 subunit beta 2, chloroplastic...	0.02	Orthogroups_2024-Update
At3g23990	No alias	Chaperonin CPN60, mitochondrial...	0.02	Orthogroups_2024-Update
Bradi2g18260	No alias	heat shock protein 60-3A	0.05	Orthogroups_2024-Update
Bradi4g38090	No alias	TCP-1/cpn60 chaperonin family protein	0.04	Orthogroups_2024-Update
Brara.C03496.1	No alias	chaperone *(Hsp60)	0.03	Orthogroups_2024-Update
Brara.E01070.1	No alias	chaperone *(Hsp60)	0.02	Orthogroups_2024-Update
GRMZM2G416120	No alias	heat shock protein 60	0.02	Orthogroups_2024-Update
Glyma.07G009600	No alias	heat shock protein 60-3A	0.05	Orthogroups_2024-Update
Glyma.10G127800	No alias	heat shock protein 60	0.03	Orthogroups_2024-Update
Glyma.15G250500	No alias	TCP-1/cpn60 chaperonin family protein	0.02	Orthogroups_2024-Update
Glyma.20G079300	No alias	heat shock protein 60	0.04	Orthogroups_2024-Update
Kfl00076_0150	kfl00076_0150_v1....	(p08927\|rubb_pea : 851.0) RuBisCO large subunit-binding...	0.04	Orthogroups_2024-Update
Sobic.009G214100.1	No alias	chaperone *(Hsp60)	0.03	Orthogroups_2024-Update
Sobic.010G011200.1	No alias	chaperone *(Hsp60) & subunit beta of CPN60 assembly...	0.02	Orthogroups_2024-Update
Solyc02g068730	No alias	Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI)	0.03	Orthogroups_2024-Update
Solyc03g120850	No alias	Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU)	0.02	Orthogroups_2024-Update
Solyc05g053470	No alias	Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH)	0.03	Orthogroups_2024-Update
Sopen09g034150	No alias	TCP-1/cpn60 chaperonin family	0.05	Orthogroups_2024-Update
evm.model.contig_4417.1	No alias	(at2g28000 : 575.0) Encodes chaperonin-60 alpha, a...	0.03	Orthogroups_2024-Update
evm.model.contig_552.1	No alias	(q05046\|ch62_cucma : 684.0) Chaperonin CPN60-2,...	0.03	Orthogroups_2024-Update
evm.model.tig00001269.7	No alias	(q05046\|ch62_cucma : 728.0) Chaperonin CPN60-2,...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	IEP	Predicted GO
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Predicted GO
BP	GO:0006188	IMP biosynthetic process	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016787	hydrolase activity	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016842	amidine-lyase activity	IEP	Predicted GO
MF	GO:0016887	ATPase activity	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Predicted GO
BP	GO:0046040	IMP metabolic process	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Predicted GO
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predicted GO
MF	GO:1990380	Lys48-specific deubiquitinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	58	557

External Links

No external refs found!

Seita.3G163700.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation