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  5. Seita.3G171600.1

Seita.3G171600.1


Description : ER-tubule curvature-inducing protein *(Reticulon)


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G171600.1
Cluster HCAA Clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Bradi2g17560 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
Glyma.13G062400 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
Glyma.20G163700 No alias VIRB2-interacting protein 1 0.04 Orthogroups_2024-Update
LOC_Os01g12650 No alias reticulon domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g21840 No alias reticulon domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g24770 No alias reticulon domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.5G013200.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Seita.7G086000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Sopen05g004640 No alias Reticulon 0.03 Orthogroups_2024-Update
Sopen06g034100 No alias Reticulon 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 67 221
No external refs found!