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  5. Seita.3G173400.1

Seita.3G173400.1


Description : Unknown function


Gene families : OG_42_0000415 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G173400.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
444788 No alias Function unknown 0.02 Orthogroups_2024-Update
A4A49_08723 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At2g24550 No alias At2g24550/F25P17.15 [Source:UniProtKB/TrEMBL;Acc:Q945P6] 0.03 Orthogroups_2024-Update
At5g24890 No alias At5g24890 [Source:UniProtKB/TrEMBL;Acc:Q8L9W8] 0.03 Orthogroups_2024-Update
Bradi2g19350 No alias oxidative stress 3 0.03 Orthogroups_2024-Update
Bradi3g08620 No alias oxidative stress 3 0.03 Orthogroups_2024-Update
Bradi3g40660 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi3g51920 No alias oxidative stress 3 0.02 Orthogroups_2024-Update
Bradi4g34240 No alias Function unknown 0.03 Orthogroups_2024-Update
Brara.A01621.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.B00940.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C01223.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D01480.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I00560.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I04468.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G011006 No alias oxidative stress 3 0.03 Orthogroups_2024-Update
Glyma.04G076000 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.06G077200 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.07G125600 No alias oxidative stress 3 0.03 Orthogroups_2024-Update
Glyma.14G098200 No alias Function unknown 0.05 Orthogroups_2024-Update
Glyma.17G226500 No alias Function unknown 0.04 Orthogroups_2024-Update
Potri.001G190700 No alias oxidative stress 3 0.05 Orthogroups_2024-Update
Potri.006G219800 No alias Function unknown 0.02 Orthogroups_2024-Update
Potri.006G273100 No alias Function unknown 0.04 Orthogroups_2024-Update
Potri.018G048100 No alias Function unknown 0.03 Orthogroups_2024-Update
Pp1s271_68V6 No alias T6G21.26; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s78_39V6 No alias No description available 0.04 Orthogroups_2024-Update
Seita.4G244600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G254200.1 No alias Unknown function 0.14 Orthogroups_2024-Update
Sobic.004G279700.1 No alias Unknown function 0.13 Orthogroups_2024-Update
Sobic.006G191600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.007G150200.1 No alias Unknown function 0.13 Orthogroups_2024-Update
Solyc03g031890 No alias Oxidative stress 3, putative isoform 2 (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc05g025900 No alias Damaged dna-binding 2, putative isoform 1 (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc06g066420 No alias Oxidative stress 3, putative isoform 1 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc08g061490 No alias Damaged dna-binding 2, putative isoform 1 (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Sopen03g005760 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen03g039920 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Sopen06g024710 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Sopen08g016830 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!