Seita.3G176600.1

Description : PHD-type transcription factor

Gene families : OG_42_0002398 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002398_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.3G176600.1
Cluster	HCAA Clusters: Cluster_158

Target	Alias	Description	ECC score	Gene Family Method	Actions
A4A49_09262	No alias	pathogenesis-related homeodomain protein	0.03	Orthogroups_2024-Update
PSME_00031735-RA	No alias	(at3g19510 : 202.0) Encodes a member of the PHD-finger...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
MF	GO:0004725	protein tyrosine phosphatase activity	IEP	Predicted GO
BP	GO:0006470	protein dephosphorylation	IEP	Predicted GO
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predicted GO
BP	GO:0016311	dephosphorylation	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0016791	phosphatase activity	IEP	Predicted GO
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	588	627
IPR019787	Znf_PHD-finger	216	271

External Links

No external refs found!