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  5. Seita.3G185800.1

Seita.3G185800.1


Description : ER luminal lectin chaperone *(CRT) & component *(CRT3) of ER luminal chaperone complex


Gene families : OG_42_0001219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G185800.1
Cluster HCAA Clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G358059 No alias calreticulin 1a 0.04 Orthogroups_2024-Update
Kfl00090_0160 kfl00090_0160_v1.1 (at1g56340 : 471.0) Encodes one of three Arabidopsis... 0.03 Orthogroups_2024-Update
Pp1s34_31V6 No alias at1g09210 t12m4_8 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
CC GO:0005783 endoplasmic reticulum IEA 16Dec
BP GO:0006457 protein folding IEA 16Dec
MF GO:0051082 unfolded protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001580 Calret/calnex 262 335
IPR001580 Calret/calnex 25 260
No external refs found!