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  5. Seita.3G186300.1

Seita.3G186300.1


Description : Unknown function


Gene families : OG_42_0000085 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G186300.1
Cluster HCAA Clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Brara.G00795.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G048904 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G112686 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os01g11710 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g11910 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g11970 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.T143700 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Sobic.010G156000.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001087 GDSL 36 362
No external refs found!