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  5. Seita.3G196500.1

Seita.3G196500.1


Description : calcium sensor *(CML) & calcium sensor *(CaM)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G196500.1
Cluster HCAA Clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G044963 No alias calmodulin 5 0.02 Orthogroups_2024-Update
Glyma.14G040600 No alias calmodulin 5 0.02 Orthogroups_2024-Update
Seita.3G380800.1 No alias calcium sensor *(CML) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 12 73
IPR002048 EF_hand_dom 83 146
No external refs found!