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  5. Seita.3G199300.1

Seita.3G199300.1


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G199300.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
A4A49_09160 No alias transcription repressor kan1 0.03 Orthogroups_2024-Update
A4A49_11176 No alias putative myb family transcription factor 0.03 Orthogroups_2024-Update
A4A49_12162 No alias protein phosphate starvation response 1 0.03 Orthogroups_2024-Update
A4A49_31971 No alias myb family transcription factor phl11 0.03 Orthogroups_2024-Update
AC234155.1_FG002 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
At1g32240 No alias Probable transcription factor KAN2... 0.02 Orthogroups_2024-Update
At2g01060 No alias Myb family transcription factor PHL7... 0.03 Orthogroups_2024-Update
At2g40260 No alias Homeodomain-like superfamily protein... 0.02 Orthogroups_2024-Update
At3g24120 No alias Homeodomain-like superfamily protein [Source:TAIR;Acc:AT3G24120] 0.02 Orthogroups_2024-Update
At4g17695 No alias Probable transcription factor KAN3... 0.03 Orthogroups_2024-Update
At5g42630 No alias Probable transcription factor KAN4... 0.02 Orthogroups_2024-Update
Bradi1g14480 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.B02368.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.03 Orthogroups_2024-Update
Brara.B03010.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Brara.B03508.1 No alias GARP subgroup PHL transcription factor & transcription... 0.02 Orthogroups_2024-Update
Brara.F00986.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Brara.G02474.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Brara.H01468.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.I01162.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.J01739.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Brara.J02547.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G069525 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G175827 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G250000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G106800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G229800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G196600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G043000 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G107670.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
LOC_Os07g25710 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g12770 No alias Myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os12g01490 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00002495-RA No alias (at1g32240 : 135.0) Encodes a member of the KANADI... 0.02 Orthogroups_2024-Update
PSME_00003323-RA No alias (at3g24120 : 251.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00007589-RA No alias (at2g40260 : 115.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00022449-RA No alias (at2g40260 : 137.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00036264-RA No alias (at5g29000 : 213.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00040944-RA No alias (at3g04030 : 275.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00043566-RA No alias (at3g04030 : 229.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.001G314800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G100100 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G205900 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.011G023600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s27_9V6 No alias MUJ8.2; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s47_90V6 No alias at3g24120 muj8_3 0.02 Orthogroups_2024-Update
Pp1s55_182V6 No alias T3G21.3; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.6G120200.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G121600.1 No alias GARP subgroup PHL transcription factor & transcription... 0.04 Orthogroups_2024-Update
Sobic.004G273000.1 No alias KANADI-type transcription factor 0.03 Orthogroups_2024-Update
Solyc05g055940 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen06g021670 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen08g024980 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0007265 Ras protein signal transduction IEP Predicted GO
BP GO:0007266 Rho protein signal transduction IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 145 192
IPR001005 SANT/Myb 46 97
No external refs found!