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  5. Seita.3G200600.1

Seita.3G200600.1


Description : Unknown function


Gene families : OG_42_0001426 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G200600.1
Cluster HCAA Clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G207500 No alias TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein 0.02 Orthogroups_2024-Update
Potri.005G206000 No alias TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein 0.02 Orthogroups_2024-Update
Seita.3G182900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G308800.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006634 TLC-dom 49 242
No external refs found!