Seita.3G205000.1

Description : component *(eS26) of small ribosomal-subunit (SSU) proteome

Gene families : OG_42_0002386 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002386_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.3G205000.1
Cluster	HCAA Clusters: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
77589	No alias	Ribosomal protein S26e family protein	0.21	Orthogroups_2024-Update
At2g40590	No alias	40S ribosomal protein S26...	0.09	Orthogroups_2024-Update
At3g56340	No alias	40S ribosomal protein S26...	0.05	Orthogroups_2024-Update
Bradi1g04070	No alias	Ribosomal protein S26e family protein	0.17	Orthogroups_2024-Update
Bradi2g53590	No alias	Ribosomal protein S26e family protein	0.12	Orthogroups_2024-Update
Brara.D00349.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.12	Orthogroups_2024-Update
Brara.D02473.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.21	Orthogroups_2024-Update
Brara.G01691.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.23	Orthogroups_2024-Update
Brara.I03875.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.14	Orthogroups_2024-Update
Cre16.g682300	No alias	Ribosomal protein S26e family protein	0.18	Orthogroups_2024-Update
GRMZM5G827266	No alias	Ribosomal protein S26e family protein	0.17	Orthogroups_2024-Update
GRMZM5G899149	No alias	Ribosomal protein S26e family protein	0.2	Orthogroups_2024-Update
Glyma.02G239700	No alias	Ribosomal protein S26e family protein	0.02	Orthogroups_2024-Update
Glyma.14G208600	No alias	Ribosomal protein S26e family protein	0.18	Orthogroups_2024-Update
HORVU5Hr1G111820.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.19	Orthogroups_2024-Update
Kfl00199_0140	kfl00199_0140_v1.1	(at3g56340 : 92.0) Ribosomal protein S26e family...	0.04	Orthogroups_2024-Update
LOC_Os01g60790	No alias	40S ribosomal protein S26, putative, expressed	0.06	Orthogroups_2024-Update
MA_114136g0010	No alias	(p49216\|rs26_orysa : 123.0) 40S ribosomal protein S26...	0.03	Orthogroups_2024-Update
MA_74546g0010	No alias	(p49216\|rs26_orysa : 123.0) 40S ribosomal protein S26...	0.07	Orthogroups_2024-Update
Mp2g06210.1	No alias	component RPS26 of SSU proteome	0.1	Orthogroups_2024-Update
PSME_00018418-RA	No alias	(at3g56340 : 121.0) Ribosomal protein S26e family...	0.07	Orthogroups_2024-Update
Potri.013G093700	No alias	Ribosomal protein S26e family protein	0.06	Orthogroups_2024-Update
Potri.019G057000	No alias	Ribosomal protein S26e family protein	0.16	Orthogroups_2024-Update
Pp1s169_19V6	No alias	40s ribosomal protein s26	0.08	Orthogroups_2024-Update
Pp1s270_77V6	No alias	40s ribosomal protein s26	0.22	Orthogroups_2024-Update
Pp1s375_10V6	No alias	40s ribosomal protein s26	0.17	Orthogroups_2024-Update
Sobic.001G039400.2	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.32	Orthogroups_2024-Update
Sobic.009G173500.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.41	Orthogroups_2024-Update
Solyc04g008810	No alias	40S ribosomal S26-like protein (AHRD V3.3 *** I3S2G2_MEDTR)	0.32	Orthogroups_2024-Update
Solyc06g007470	No alias	40S ribosomal S26-like protein (AHRD V3.3 *** I3S2G2_MEDTR)	0.22	Orthogroups_2024-Update
Sopen04g003990	No alias	Ribosomal protein S26e	0.35	Orthogroups_2024-Update
Sopen06g002380	No alias	Ribosomal protein S26e	0.1	Orthogroups_2024-Update
evm.model.contig_2478.1	No alias	(at3g56340 : 94.4) Ribosomal protein S26e family...	0.16	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Predicted GO
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO
MF	GO:0016229	steroid dehydrogenase activity	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000892	Ribosomal_S26e	1	106

External Links

No external refs found!

Seita.3G205000.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation