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  5. Seita.3G208000.1

Seita.3G208000.1


Description : metal cation transporter *(ZIP)


Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G208000.1
Cluster HCAA Clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
92505 No alias iron regulated transporter 3 0.03 Orthogroups_2024-Update
A4A49_30636 No alias zinc transporter 4, chloroplastic 0.02 Orthogroups_2024-Update
At1g05300 No alias Zinc transporter 5 [Source:UniProtKB/Swiss-Prot;Acc:O23039] 0.02 Orthogroups_2024-Update
Glyma.11G169300 No alias ZIP metal ion transporter family 0.03 Orthogroups_2024-Update
HORVU1Hr1G070460.1 No alias metal cation transporter *(ZIP) 0.02 Orthogroups_2024-Update
HORVU4Hr1G003050.4 No alias iron/zinc/manganese/cobalt cation transporter *(IRT) &... 0.01 Orthogroups_2024-Update
LOC_Os03g46454 No alias metal cation transporter, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os04g52310 No alias metal cation transporter, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os05g10940 No alias metal cation transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g12890 No alias metal cation transporter, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g10630 No alias metal cation transporter, putative, expressed 0.01 Orthogroups_2024-Update
MA_189319g0010 No alias (at1g05300 : 299.0) member of Fe(II) transporter isolog... 0.01 Orthogroups_2024-Update
MA_199003g0010 No alias (at2g30080 : 145.0) member of Fe(II) transporter isolog... 0.02 Orthogroups_2024-Update
MA_31095g0010 No alias (at1g10970 : 347.0) A member of Zrt- and Irt-related... 0.04 Orthogroups_2024-Update
PSME_00021692-RA No alias (at1g10970 : 287.0) A member of Zrt- and Irt-related... 0.04 Orthogroups_2024-Update
Sobic.001G156800.2 No alias metal cation transporter *(ZIP) &... 0.04 Orthogroups_2024-Update
Sopen07g022760 No alias ZIP Zinc transporter 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0030001 metal ion transport IEA 16Dec
MF GO:0046873 metal ion transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003689 ZIP 43 350
No external refs found!