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  5. Seita.3G208100.1

Seita.3G208100.1


Description : metal cation transporter *(ZIP)


Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G208100.1
Cluster HCAA Clusters: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
A4A49_62748 No alias putative zinc transporter 10 0.03 Orthogroups_2024-Update
Brara.E01135.1 No alias metal cation transporter *(ZIP) 0.03 Orthogroups_2024-Update
Sobic.001G142800.2 No alias metal cation transporter *(ZIP) &... 0.03 Orthogroups_2024-Update
Sopen02g026220 No alias ZIP Zinc transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0030001 metal ion transport IEA 16Dec
MF GO:0046873 metal ion transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003689 ZIP 44 351
No external refs found!