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  5. Seita.3G217100.1

Seita.3G217100.1


Description : regulatory factor SOS5 of SOS *(Salt Overly Sensitive) signalling pathway & Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G217100.1
Cluster HCAA Clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
441324 No alias FASCICLIN-like arabinogalactan protein 8 0.02 Orthogroups_2024-Update
A4A49_01102 No alias fasciclin-like arabinogalactan protein 1 0.03 Orthogroups_2024-Update
A4A49_22028 No alias fasciclin-like arabinogalactan protein 2 0.04 Orthogroups_2024-Update
At4g12730 No alias Fasciclin-like arabinogalactan protein 2... 0.04 Orthogroups_2024-Update
Bradi4g34420 No alias FASCICLIN-like arabinogalactan 2 0.03 Orthogroups_2024-Update
Brara.I04200.1 No alias regulatory protein *(DEAP1) of exine formation &... 0.03 Orthogroups_2024-Update
Glyma.14G004200 No alias FASCICLIN-like arabinogalactan 2 0.04 Orthogroups_2024-Update
PSME_00056717-RA No alias (at2g45470 : 275.0) FASCICLIN-like arabinogalactan... 0.03 Orthogroups_2024-Update
Potri.014G071700 No alias FASCICLIN-like arabinogalactan-protein 10 0.03 Orthogroups_2024-Update
Potri.018G097000 No alias Fasciclin-like arabinogalactan family protein 0.03 Orthogroups_2024-Update
Solyc03g112880 No alias Fasciclin-like arabinogalactan family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc07g045440 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc10g005960 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 216 350
No external refs found!