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  5. Seita.3G218800.1

Seita.3G218800.1


Description : clade A phosphatase


Gene families : OG_42_0000303 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G218800.1
Cluster HCAA Clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
At5g57050 No alias AtABI2 [Source:UniProtKB/TrEMBL;Acc:A0A178UGB7] 0.03 Orthogroups_2024-Update
HORVU4Hr1G060370.1 No alias clade A phosphatase 0.04 Orthogroups_2024-Update
MA_18653g0010 No alias (at2g29380 : 286.0) highly ABA-induced PP2C gene 3... 0.04 Orthogroups_2024-Update
PSME_00002464-RA No alias (at3g11410 : 275.0) Encodes protein phosphatase 2C.... 0.05 Orthogroups_2024-Update
Potri.001G245200 No alias highly ABA-induced PP2C gene 2 0.04 Orthogroups_2024-Update
Sopen06g032810 No alias Protein phosphatase 2C 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 87 355
No external refs found!