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  5. Seita.3G219200.1

Seita.3G219200.1


Description : component *(uS8) of small ribosomal-subunit (SSU) proteome


Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G219200.1
Cluster HCAA Clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
At1g07770 No alias AT1G07770 protein [Source:UniProtKB/TrEMBL;Acc:B9DI04] 0.03 Orthogroups_2024-Update
Cre05.g234637 No alias Ribosomal protein S8 family protein 0.01 Orthogroups_2024-Update
PSME_00029608-RA No alias (at5g59850 : 179.0) Ribosomal protein S8 family protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 7 130
No external refs found!