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  5. At4g19990

At4g19990


Description : FAR1-related sequence 1 [Source:UniProtKB/TrEMBL;Acc:F4JU19]


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g19990
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
At1g52520 No alias Protein FAR1-RELATED SEQUENCE 6... 0.07 Orthogroups_2024-Update
Bradi1g29147 No alias FAR1-related sequence 5 0.04 Orthogroups_2024-Update
Bradi2g04713 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Bradi2g25465 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Brara.A02741.1 No alias transcriptional regulator of red/far-red light... 0.02 Orthogroups_2024-Update
Brara.E02013.1 No alias transcriptional regulator of red/far-red light... 0.07 Orthogroups_2024-Update
Glyma.03G136800 No alias FAR1-related sequence 6 0.03 Orthogroups_2024-Update
Glyma.06G229800 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.09G001300 No alias FRS (FAR1 Related Sequences) transcription factor family 0.06 Orthogroups_2024-Update
Glyma.10G121700 No alias FAR1-related sequence 5 0.04 Orthogroups_2024-Update
Glyma.11G126700 No alias FRS (FAR1 Related Sequences) transcription factor family 0.03 Orthogroups_2024-Update
Glyma.20G024700 No alias FAR1-related sequence 6 0.04 Orthogroups_2024-Update
HORVU2Hr1G102940.1 No alias FRS/FRF-type transcription factor 0.04 Orthogroups_2024-Update
HORVU4Hr1G020290.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G056070.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G055990.3 No alias FRS/FRF-type transcription factor 0.05 Orthogroups_2024-Update
LOC_Os01g63380 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g06820 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g34590 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g39540 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g45300 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g25100 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g04860 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g18840 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g14020 No alias transposon protein, putative, unclassified, expressed 0.04 Orthogroups_2024-Update
Potri.010G140600 No alias FAR1-related sequence 11 0.03 Orthogroups_2024-Update
Seita.1G186800.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.2G152300.1 No alias FRS/FRF-type transcription factor 0.05 Orthogroups_2024-Update
Seita.2G330400.1 No alias FRS/FRF-type transcription factor 0.05 Orthogroups_2024-Update
Seita.7G237000.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g096850 No alias Protein FAR1-RELATED SEQUENCE 3 (AHRD V3.3 *** A0A0B2S126_GLYSO) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 165 255
IPR004330 FAR1_DNA_bnd_dom 2 79
IPR007527 Znf_SWIM 458 482
No external refs found!