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At4g20050


Description : Pectin lyase-like superfamily protein [Source:TAIR;Acc:AT4G20050]


Gene families : OG_42_0002920 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002920_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g20050
Cluster HCCA clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
A4A49_31908 No alias polygalacturonase qrt3 0.01 Orthogroups_2024-Update
Glyma.19G032600 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s398_21V6 No alias F18F4.150; expressed protein [Arabidopsis thaliana] 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 78 298
No external refs found!