Seita.3G245500.1

Description : 1-deoxy-D-xylulose 5-phosphate synthase *(DXS) & EC_2.2 transferase transferring aldehyde or ketonic group

Gene families : OG_42_0001316 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001316_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.3G245500.1
Cluster	HCAA Clusters: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g25550	No alias	Deoxyxylulose-5-phosphate synthase	0.02	Orthogroups_2024-Update
Glyma.13G213500	No alias	Deoxyxylulose-5-phosphate synthase	0.04	Orthogroups_2024-Update
Mp2g09130.1	No alias	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.02	Orthogroups_2024-Update
Sobic.009G135500.1	No alias	1-deoxy-D-xylulose 5-phosphate synthase *(DXS) & EC_2.2...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEA	16Dec
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	IEA	16Dec
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Predicted GO
MF	GO:0004618	phosphoglycerate kinase activity	IEP	Predicted GO
BP	GO:0006090	pyruvate metabolic process	IEP	Predicted GO
BP	GO:0006096	glycolytic process	IEP	Predicted GO
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Predicted GO
BP	GO:0006757	ATP generation from ADP	IEP	Predicted GO
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009166	nucleotide catabolic process	IEP	Predicted GO
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Predicted GO
CC	GO:0009512	cytochrome b6f complex	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
BP	GO:0010206	photosystem II repair	IEP	Predicted GO
BP	GO:0010207	photosystem II assembly	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Predicted GO
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Predicted GO
BP	GO:0018208	peptidyl-proline modification	IEP	Predicted GO
BP	GO:0030091	protein repair	IEP	Predicted GO
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Predicted GO
BP	GO:0042866	pyruvate biosynthetic process	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
BP	GO:0046031	ADP metabolic process	IEP	Predicted GO
BP	GO:0046939	nucleotide phosphorylation	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO
CC	GO:0070069	cytochrome complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005475	Transketolase-like_Pyr-bd	391	553
IPR033248	Transketolase_C	571	694
IPR005477	Dxylulose-5-P_synthase	70	355

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Seita.3G245500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation