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  5. Seita.3G246500.1

Seita.3G246500.1


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex


Gene families : OG_42_0002622 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002622_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G246500.1
Cluster HCAA Clusters: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G023000 No alias transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
Seita.5G175600.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 248 282
IPR001680 WD40_repeat 365 408
IPR001680 WD40_repeat 207 239
IPR001680 WD40_repeat 293 327
IPR001680 WD40_repeat 413 447
No external refs found!