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  5. Seita.3G248400.1

Seita.3G248400.1


Description : Unknown function


Gene families : OG_42_0000263 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G248400.1
Cluster HCAA Clusters: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g38180 No alias OsFBDUF59 - F-box and DUF domain containing protein, expressed 0.03 Orthogroups_2024-Update
Solyc02g092020 No alias F-box protein SKIP23 (AHRD V3.3 *** A0A151TCP0_CAJCA) 0.02 Orthogroups_2024-Update
Solyc08g061380 No alias WD40 domain-containing protein (AHRD V3.3 --* AT2G47410.6) 0.03 Orthogroups_2024-Update
Solyc08g082510 No alias LOW QUALITY:F-box protein (AHRD V3.3 *** W9RW78_9ROSA) 0.04 Orthogroups_2024-Update
Sopen06g025910 No alias Protein of unknown function (DUF295) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR005174 DUF295 206 263
No external refs found!