Seita.3G248800.1

Description : mTERF-type transcription factor

Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.3G248800.1
Cluster	HCAA Clusters: Cluster_157

Target	Alias	Description	ECC score	Gene Family Method
A4A49_21460	No alias	transcription termination factor mterf5, chloroplastic	0.01	Orthogroups_2024-Update
A4A49_38163	No alias	transcription termination factor mterf15, mitochondrial	0.03	Orthogroups_2024-Update
Bradi1g45347	No alias	Mitochondrial transcription termination factor family protein	0.05	Orthogroups_2024-Update
Bradi2g25372	No alias	Mitochondrial transcription termination factor family protein	0.06	Orthogroups_2024-Update
Bradi3g00780	No alias	Mitochondrial transcription termination factor family protein	0.08	Orthogroups_2024-Update
Bradi3g59167	No alias	Mitochondrial transcription termination factor family protein	0.01	Orthogroups_2024-Update
Glyma.18G107500	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
LOC_Os01g27690	No alias	expressed protein	0.02	Orthogroups_2024-Update
LOC_Os11g14130	No alias	mTERF family protein, expressed	0.01	Orthogroups_2024-Update
MA_187605g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_593288g0010	No alias	(at1g79220 : 104.0) Mitochondrial transcription...	0.01	Orthogroups_2024-Update
PSME_00020293-RA	No alias	(at5g23930 : 110.0) Mitochondrial transcription...	0.01	Orthogroups_2024-Update
PSME_00032600-RA	No alias	(at5g64950 : 90.5) Mitochondrial transcription...	0.01	Orthogroups_2024-Update
PSME_00049593-RA	No alias	(at5g64950 : 87.0) Mitochondrial transcription...	0.01	Orthogroups_2024-Update
Seita.4G095900.1	No alias	mTERF-type transcription factor	0.01	Orthogroups_2024-Update
Sobic.004G235500.1	No alias	mTERF-type transcription factor	0.11	Orthogroups_2024-Update
Sobic.006G183301.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc04g072510	No alias	Mitochondrial transcription termination factor family...	0.01	Orthogroups_2024-Update
Solyc04g072520	No alias	Mitochondrial transcription termination factor family...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003690	MTERF	89	326

External Links

No external refs found!

Seita.3G248800.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation