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  5. Seita.3G249300.1

Seita.3G249300.1


Description : Unknown function


Gene families : OG_42_0000713 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G249300.1
Cluster HCAA Clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At3g63310 No alias Protein LIFEGUARD 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1V9] 0.03 Orthogroups_2024-Update
Brara.H00806.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_1307g0010 No alias (at4g15470 : 139.0) Bax inhibitor-1 family protein;... 0.03 Orthogroups_2024-Update
Sobic.001G057800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.contig_4461.9 No alias (at4g15470 : 135.0) Bax inhibitor-1 family protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR006214 Bax_inhibitor_1-related 54 256
No external refs found!