1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.3G250700.1

Seita.3G250700.1


Description : Unknown function


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G250700.1
Cluster HCAA Clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Bradi2g60860 No alias germin-like protein subfamily 2 member 2 precursor 0.03 Orthogroups_2024-Update
Bradi2g60870 No alias germin-like protein subfamily 2 member 2 precursor 0.04 Orthogroups_2024-Update
Bradi3g17316 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
Brara.B00896.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G161097 No alias germin-like protein subfamily 2 member 2 precursor 0.02 Orthogroups_2024-Update
Glyma.10G168800 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G086100 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G086400 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G009390.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G009440.4 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU0Hr1G009450.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G017170.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G107860.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_270265g0010 No alias (at1g10460 : 164.0) germin-like protein (GLP7);... 0.02 Orthogroups_2024-Update
MA_5449g0010 No alias (at3g10080 : 224.0) RmlC-like cupins superfamily... 0.05 Orthogroups_2024-Update
MA_579918g0010 No alias (q9s8p4|rhre_pea : 172.0) Rhicadhesin receptor precursor... 0.02 Orthogroups_2024-Update
MA_926447g0010 No alias (at5g20630 : 238.0) Encodes a germin-like protein. Its... 0.02 Orthogroups_2024-Update
PSME_00054465-RA No alias (at1g09560 : 210.0) germin-like protein (GLP5);... 0.03 Orthogroups_2024-Update
Potri.005G001300 No alias germin-like protein 10 0.03 Orthogroups_2024-Update
Potri.010G238100 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Pp1s10_279V6 No alias No description available 0.02 Orthogroups_2024-Update
Sobic.003G060000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G059100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g102390 No alias Germin-like protein (AHRD V1 ***- O65358_SOLTU)%3B... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 77 216
No external refs found!