Seita.3G258600.1


Description : Unknown function


Gene families : OG_42_0013468 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0013468_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G258600.1
Cluster HCAA Clusters: Cluster_238


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004814 arginine-tRNA ligase activity IEP Predicted GO
BP GO:0006420 arginyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 658 681
IPR002885 Pentatricopeptide_repeat 228 257
IPR002885 Pentatricopeptide_repeat 484 513
IPR002885 Pentatricopeptide_repeat 423 450
IPR002885 Pentatricopeptide_repeat 168 196
IPR002885 Pentatricopeptide_repeat 197 225
IPR002885 Pentatricopeptide_repeat 360 389
IPR002885 Pentatricopeptide_repeat 330 357
IPR002885 Pentatricopeptide_repeat 394 418
IPR002885 Pentatricopeptide_repeat 62 110
IPR002885 Pentatricopeptide_repeat 582 629
IPR002885 Pentatricopeptide_repeat 451 477
No external refs found!