Seita.3G265400.1

Description : aminoacyl-tRNA binding factor *(eEF1A))

Gene families : OG_42_0000485 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.3G265400.1
Cluster	HCAA Clusters: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method
169717	No alias	GTP binding Elongation factor Tu family protein	0.05	Orthogroups_2024-Update
171512	No alias	GTP binding Elongation factor Tu family protein	0.06	Orthogroups_2024-Update
270693	No alias	GTP binding Elongation factor Tu family protein	0.02	Orthogroups_2024-Update
Bradi1g06851	No alias	GTP binding Elongation factor Tu family protein	0.04	Orthogroups_2024-Update
Bradi1g06870	No alias	GTP binding Elongation factor Tu family protein	0.04	Orthogroups_2024-Update
Bradi1g65725	No alias	GTP binding Elongation factor Tu family protein	0.04	Orthogroups_2024-Update
Brara.B01038.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.1	Orthogroups_2024-Update
Brara.B01040.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.09	Orthogroups_2024-Update
Brara.C01040.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.08	Orthogroups_2024-Update
Brara.E01218.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.05	Orthogroups_2024-Update
Brara.H02895.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.05	Orthogroups_2024-Update
Brara.I05330.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.05	Orthogroups_2024-Update
Brara.I05331.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.04	Orthogroups_2024-Update
Brara.J01398.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.06	Orthogroups_2024-Update
GRMZM2G001327	No alias	GTP binding Elongation factor Tu family protein	0.03	Orthogroups_2024-Update
GRMZM2G110509	No alias	GTP binding Elongation factor Tu family protein	0.03	Orthogroups_2024-Update
GRMZM2G149768	No alias	GTP binding Elongation factor Tu family protein	0.05	Orthogroups_2024-Update
GRMZM2G151193	No alias	GTP binding Elongation factor Tu family protein	0.05	Orthogroups_2024-Update
GRMZM2G153541	No alias	GTP binding Elongation factor Tu family protein	0.03	Orthogroups_2024-Update
GRMZM2G154218	No alias	GTP binding Elongation factor Tu family protein	0.03	Orthogroups_2024-Update
Glyma.05G089000	No alias	GTP binding Elongation factor Tu family protein	0.06	Orthogroups_2024-Update
Glyma.05G114900	No alias	GTP binding Elongation factor Tu family protein	0.04	Orthogroups_2024-Update
Glyma.17G186600	No alias	GTP binding Elongation factor Tu family protein	0.04	Orthogroups_2024-Update
Glyma.19G052400	No alias	GTP binding Elongation factor Tu family protein	0.07	Orthogroups_2024-Update
HORVU0Hr1G017020.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.08	Orthogroups_2024-Update
HORVU4Hr1G056740.5	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.04	Orthogroups_2024-Update
HORVU4Hr1G056820.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.04	Orthogroups_2024-Update
HORVU4Hr1G056830.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.04	Orthogroups_2024-Update
HORVU5Hr1G100700.3	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.04	Orthogroups_2024-Update
MA_434977g0010	No alias	(p25698\|ef1a_soybn : 756.0) Elongation factor 1-alpha...	0.04	Orthogroups_2024-Update
Mp3g23400.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	Orthogroups_2024-Update
Mp6g18140.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	Orthogroups_2024-Update
PSME_00014556-RA	No alias	(o64937\|ef1a_orysa : 851.0) Elongation factor 1-alpha...	0.04	Orthogroups_2024-Update
PSME_00035389-RA	No alias	(p34823\|ef1a2_dauca : 304.0) Elongation factor 1-alpha...	0.03	Orthogroups_2024-Update
Pp1s59_167V6	No alias	elongation factor 1-	0.04	Orthogroups_2024-Update
Pp1s7_445V6	No alias	elongation factor 1-	0.03	Orthogroups_2024-Update
Sobic.010G182100.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.13	Orthogroups_2024-Update
Sobic.010G182200.2	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.04	Orthogroups_2024-Update
Sobic.010G182300.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.14	Orthogroups_2024-Update
Sobic.010G182600.4	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.12	Orthogroups_2024-Update
Solyc06g005060	No alias	elongation factor 1-alpha	0.08	Orthogroups_2024-Update
Solyc06g009960	No alias	Elongation factor 1-alpha (AHRD V3.3 - EF1A_SOLLC)	0.05	Orthogroups_2024-Update
Solyc06g009970	No alias	Elongation factor 1-alpha (AHRD V3.3 *** EF1A_SOLLC)	0.02	Orthogroups_2024-Update
Solyc11g069700	No alias	Elongation factor 1-alpha (AHRD V3.3 *** EF1A_SOLLC)	0.03	Orthogroups_2024-Update
Sopen06g004650	No alias	Elongation factor Tu GTP binding domain	0.07	Orthogroups_2024-Update
Sopen11g027830	No alias	Elongation factor Tu GTP binding domain	0.06	Orthogroups_2024-Update
Sopen11g028580	No alias	Elongation factor Tu GTP binding domain	0.03	Orthogroups_2024-Update
evm.model.contig_509.2	No alias	(p25698\|ef1a_soybn : 335.0) Elongation factor 1-alpha...	0.09	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	16Dec
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003735	structural constituent of ribosome	IEP	Predicted GO
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Predicted GO
MF	GO:0005198	structural molecule activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
CC	GO:0005681	spliceosomal complex	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
CC	GO:0005840	ribosome	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006412	translation	IEP	Predicted GO
BP	GO:0006486	protein glycosylation	IEP	Predicted GO
BP	GO:0006487	protein N-linked glycosylation	IEP	Predicted GO
BP	GO:0006518	peptide metabolic process	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0006886	intracellular protein transport	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
BP	GO:0008104	protein localization	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Predicted GO
MF	GO:0008408	3'-5' exonuclease activity	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
BP	GO:0015031	protein transport	IEP	Predicted GO
BP	GO:0015833	peptide transport	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
BP	GO:0018196	peptidyl-asparagine modification	IEP	Predicted GO
BP	GO:0018279	protein N-linked glycosylation via asparagine	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0019899	enzyme binding	IEP	Predicted GO
MF	GO:0031267	small GTPase binding	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
BP	GO:0033036	macromolecule localization	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0042886	amide transport	IEP	Predicted GO
BP	GO:0043043	peptide biosynthetic process	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043413	macromolecule glycosylation	IEP	Predicted GO
BP	GO:0043603	cellular amide metabolic process	IEP	Predicted GO
BP	GO:0043604	amide biosynthetic process	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044432	endoplasmic reticulum part	IEP	Predicted GO
CC	GO:0044444	cytoplasmic part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
BP	GO:0045184	establishment of protein localization	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0046907	intracellular transport	IEP	Predicted GO
MF	GO:0051020	GTPase binding	IEP	Predicted GO
BP	GO:0051641	cellular localization	IEP	Predicted GO
BP	GO:0051649	establishment of localization in cell	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO
BP	GO:0070085	glycosylation	IEP	Predicted GO
BP	GO:0071702	organic substance transport	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
BP	GO:0071705	nitrogen compound transport	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO
CC	GO:1990904	ribonucleoprotein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000795	TF_GTP-bd_dom	5	222
IPR004160	Transl_elong_EFTu/EF1A_C	321	429
IPR004161	EFTu-like_2	248	313

External Links

No external refs found!

Seita.3G265400.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation