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  5. Seita.3G279900.1

Seita.3G279900.1


Description : plant-specific ALOG-type transcription factor


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G279900.1
Cluster HCAA Clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Brara.A00975.1 No alias plant-specific ALOG-type transcription factor 0.05 Orthogroups_2024-Update
Brara.E00304.1 No alias plant-specific ALOG-type transcription factor 0.05 Orthogroups_2024-Update
Brara.K00432.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.19G248300 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Potri.008G167700 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Pp1s10_72V6 No alias T16B12.3; expressed protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Solyc02g069510 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.03 Orthogroups_2024-Update
Solyc06g083860 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.03 Orthogroups_2024-Update
Solyc10g008000 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.03 Orthogroups_2024-Update
Sopen02g021720 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Sopen07g027140 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Sopen10g003870 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 81 201
No external refs found!