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  5. Seita.3G280400.1

Seita.3G280400.1


Description : MADS/AGL-type transcription factor


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G280400.1
Cluster HCAA Clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
A4A49_07845 No alias agamous-like mads-box protein agl8 0.04 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.02 Orthogroups_2024-Update
A4A49_27621 No alias agamous-like mads-box protein agl9 0.02 Orthogroups_2024-Update
At1g24260 No alias At1g24260 [Source:UniProtKB/TrEMBL;Acc:B4F7R9] 0.02 Orthogroups_2024-Update
At1g77980 No alias Agamous-like MADS-box protein AGL66... 0.04 Orthogroups_2024-Update
Bradi2g38695 No alias MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi3g51800 No alias AGAMOUS-like 6 0.02 Orthogroups_2024-Update
Brara.C04645.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E02241.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G01735.1 No alias MADS/AGL-type transcription factor 0.06 Orthogroups_2024-Update
Brara.I02486.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J00749.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.K00198.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K00360.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G171365 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
Glyma.05G050700 No alias AGAMOUS-like 19 0.04 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.05 Orthogroups_2024-Update
Glyma.17G081200 No alias AGAMOUS-like 8 0.04 Orthogroups_2024-Update
HORVU1Hr1G063620.2 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.04 Orthogroups_2024-Update
HORVU6Hr1G066140.9 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.02 Orthogroups_2024-Update
HORVU7Hr1G054320.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os02g06860 No alias OsMADS80 - MADS-box family gene with M-alpha type-box, expressed 0.04 Orthogroups_2024-Update
LOC_Os10g39130 No alias OsMADS56 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g10540 No alias OsMADS13 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g31748 No alias OsMADS20 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
MA_211156g0010 No alias (q40885|ag_pethy : 164.0) Floral homeotic protein... 0.02 Orthogroups_2024-Update
MA_333471g0010 No alias (at2g45660 : 106.0) Controls flowering and is required... 0.06 Orthogroups_2024-Update
Potri.004G131100 No alias AGAMOUS-like 29 0.03 Orthogroups_2024-Update
Potri.008G098500 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Pp1s163_73V6 No alias mikc* mads-box transcription factor 0.05 Orthogroups_2024-Update
Pp1s209_130V6 No alias mads-box transcription factor 0.04 Orthogroups_2024-Update
Pp1s88_174V6 No alias mads box 0.03 Orthogroups_2024-Update
Seita.2G002300.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.04 Orthogroups_2024-Update
Seita.3G236800.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.04 Orthogroups_2024-Update
Sobic.001G314400.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G258000.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Solyc10g017630 No alias MADS-box transcription factor (AHRD V3.3 *** Q1EMR8_PLAMJ) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006754 ATP biosynthetic process IEP Predicted GO
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0046034 ATP metabolic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 21 68
No external refs found!