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  5. Seita.3G283000.1

Seita.3G283000.1


Description : anion transporter *(NRT1/PTR)


Gene families : OG_42_0002855 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002855_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G283000.1
Cluster HCAA Clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
At3g45690 No alias Putative protein NRT1/ PTR FAMILY 2.2... 0.02 Orthogroups_2024-Update
At3g45720 No alias Protein NRT1/ PTR FAMILY 2.1... 0.03 Orthogroups_2024-Update
Sopen11g030220 No alias POT family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 146 562
No external refs found!