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  5. Seita.3G283900.1

Seita.3G283900.1


Description : subunit alpha of Cpn60 chaperonin complex & subunit alpha of CPN60 assembly chaperone heterodimer & chaperone *(Hsp60)


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G283900.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
168153 No alias chaperonin 60 beta 0.03 Orthogroups_2024-Update
405358 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
A4A49_39526 No alias chaperonin 60 subunit beta 4, chloroplastic 0.03 Orthogroups_2024-Update
At2g28000 No alias SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6] 0.03 Orthogroups_2024-Update
At2g33210 No alias Chaperonin CPN60-like 1, mitochondrial... 0.04 Orthogroups_2024-Update
At3g13470 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.03 Orthogroups_2024-Update
At3g13860 No alias Chaperonin CPN60-like 2, mitochondrial... 0.04 Orthogroups_2024-Update
At5g18820 No alias Chaperonin 60 subunit alpha 2, chloroplastic... 0.03 Orthogroups_2024-Update
At5g56500 No alias Chaperonin 60 subunit beta 3, chloroplastic... 0.04 Orthogroups_2024-Update
Bradi1g50270 No alias chaperonin 60 beta 0.15 Orthogroups_2024-Update
Bradi4g38090 No alias TCP-1/cpn60 chaperonin family protein 0.06 Orthogroups_2024-Update
Bradi5g02890 No alias chaperonin-60alpha 0.09 Orthogroups_2024-Update
Bradi5g11240 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
Brara.B00789.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.05 Orthogroups_2024-Update
Brara.E01461.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.03 Orthogroups_2024-Update
Cre04.g231222 No alias chaperonin-60alpha 0.01 Orthogroups_2024-Update
Cre17.g741450 No alias chaperonin 60 beta 0.01 Orthogroups_2024-Update
GRMZM2G074790 No alias heat shock protein 60-3A 0.07 Orthogroups_2024-Update
GRMZM2G083716 No alias chaperonin 60 beta 0.04 Orthogroups_2024-Update
GRMZM2G416120 No alias heat shock protein 60 0.02 Orthogroups_2024-Update
GRMZM2G434173 No alias chaperonin-60alpha 0.03 Orthogroups_2024-Update
Glyma.02G126300 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G007840.7 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.06 Orthogroups_2024-Update
HORVU2Hr1G077410.1 No alias subunit beta of CPN60 assembly chaperone heterodimer &... 0.03 Orthogroups_2024-Update
MA_97627g0010 No alias (p08927|rubb_pea : 646.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
PSME_00013351-RA No alias (p08927|rubb_pea : 701.0) RuBisCO large subunit-binding... 0.02 Orthogroups_2024-Update
Potri.004G213400 No alias chaperonin-60alpha 0.04 Orthogroups_2024-Update
Potri.009G009300 No alias chaperonin-60alpha 0.03 Orthogroups_2024-Update
Potri.010G135100 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
Pp1s114_95V6 No alias rubisco subunit binding-protein alpha subunit 0.03 Orthogroups_2024-Update
Pp1s149_289V6 No alias -like atpase 0.02 Orthogroups_2024-Update
Sobic.001G437801.1 No alias subunit beta of CPN60 assembly chaperone heterodimer &... 0.03 Orthogroups_2024-Update
Sobic.002G131000.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Sobic.009G098100.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.1 Orthogroups_2024-Update
Sobic.009G214100.1 No alias chaperone *(Hsp60) 0.02 Orthogroups_2024-Update
Sobic.010G011200.1 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.03 Orthogroups_2024-Update
Solyc01g028810 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.03 Orthogroups_2024-Update
Solyc03g120850 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.09 Orthogroups_2024-Update
Solyc11g069790 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.04 Orthogroups_2024-Update
Sopen01g016850 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
Sopen03g039670 No alias TCP-1/cpn60 chaperonin family 0.05 Orthogroups_2024-Update
Sopen03g040450 No alias TCP-1/cpn60 chaperonin family 0.06 Orthogroups_2024-Update
Sopen05g006000 No alias TCP-1/cpn60 chaperonin family 0.02 Orthogroups_2024-Update
Sopen05g031970 No alias TCP-1/cpn60 chaperonin family 0.02 Orthogroups_2024-Update
Sopen11g028490 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
evm.model.contig_4417.1 No alias (at2g28000 : 575.0) Encodes chaperonin-60 alpha, a... 0.02 Orthogroups_2024-Update
evm.model.contig_552.1 No alias (q05046|ch62_cucma : 684.0) Chaperonin CPN60-2,... 0.02 Orthogroups_2024-Update
evm.model.tig00020943.69 No alias (p08823|ruba_wheat : 426.0) RuBisCO large... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 58 561
No external refs found!