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  5. Seita.3G292700.1

Seita.3G292700.1


Description : A-class RAB GTPase


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G292700.1
Cluster HCAA Clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
146310 No alias RAB GTPase homolog A1F 0.03 Orthogroups_2024-Update
At2g33870 No alias ArRABA1h [Source:UniProtKB/TrEMBL;Acc:A0A178W1D1] 0.03 Orthogroups_2024-Update
Brara.A03162.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Brara.J00061.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Cre03.g189250 No alias RAB GTPase 11C 0.03 Orthogroups_2024-Update
Kfl00160_0170 kfl00160_0170_v1.1 (q39572|yptc6_chlre : 335.0) Ras-related protein YPTC6 -... 0.02 Orthogroups_2024-Update
LOC_Os05g20050 No alias ras-related protein, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.002G153500.1 No alias A-class RAB GTPase 0.02 Orthogroups_2024-Update
Sobic.002G172401.1 No alias A-class RAB GTPase 0.04 Orthogroups_2024-Update
evm.model.tig00020961.97 No alias (q39572|yptc6_chlre : 290.0) Ras-related protein YPTC6 -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 173
No external refs found!