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  5. Seita.3G313400.1

Seita.3G313400.1


Description : component *(SPT16) of FACT histone chaperone complex


Gene families : OG_42_0002687 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002687_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Setaria italica: Seita.3G313400.1
Cluster HCAA Clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
GRMZM5G806358 No alias global transcription factor C 0.02 Orthogroups_2024-Update
Glyma.18G044600 No alias global transcription factor C 0.02 Orthogroups_2024-Update
HORVU7Hr1G038210.3 No alias component *(SPT16) of FACT histone chaperone complex 0.03 Orthogroups_2024-Update
LOC_Os12g26030 No alias FACT complex subunit SPT16, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g28760.1 No alias component SPT16 of FACT histone chaperone complex 0.03 Orthogroups_2024-Update
Pp1s374_49V6 No alias global transcription factor group 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0061666 UFM1 ligase activity IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013719 DUF1747 776 858
IPR029148 FACT-Spt16_Nlobe 23 181
IPR000994 Pept_M24 199 328
IPR013953 FACT_Spt16p 516 646
No external refs found!