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  5. Seita.3G327800.1

Seita.3G327800.1


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G327800.1
Cluster HCAA Clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
A4A49_04752 No alias dof zinc finger protein dof3.5 0.01 Orthogroups_2024-Update
A4A49_33562 No alias dof zinc finger protein dof4.6 0.01 Orthogroups_2024-Update
Bradi3g25670 No alias cycling DOF factor 1 0.02 Orthogroups_2024-Update
Brara.F01530.1 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Brara.F02115.1 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Brara.I00088.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Glyma.06G194800 No alias cycling DOF factor 3 0.01 Orthogroups_2024-Update
Glyma.12G063800 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.15G082400 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.17G101000 No alias cycling DOF factor 3 0.01 Orthogroups_2024-Update
Glyma.19G118000 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Glyma.20G035200 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
HORVU2Hr1G017290.1 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
HORVU4Hr1G013890.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU6Hr1G065250.4 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
MA_10436933g0030 No alias (at3g47500 : 125.0) Dof-type zinc finger... 0.08 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.01 Orthogroups_2024-Update
Potri.005G131600 No alias OBF binding protein 1 0.05 Orthogroups_2024-Update
Potri.007G036400 No alias OBF binding protein 1 0.01 Orthogroups_2024-Update
Potri.011G047500 No alias OBF binding protein 4 0.01 Orthogroups_2024-Update
Potri.014G036600 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Pp1s118_226V6 No alias f-box family protein 0.02 Orthogroups_2024-Update
Pp1s68_214V6 No alias zinc finger 0.04 Orthogroups_2024-Update
Seita.6G192200.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.001G252800.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Sobic.006G267900.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.009G014400.1 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.01 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.01 Orthogroups_2024-Update
Sopen02g016410 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen06g022000 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0030151 molybdenum ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 107 161
No external refs found!