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  5. Seita.3G339100.1

Seita.3G339100.1


Description : substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0001322 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001322_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Setaria italica: Seita.3G339100.1
Cluster HCAA Clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
Brara.I00450.1 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
GRMZM2G022298 No alias F-box family protein 0.03 Orthogroups_2024-Update
GRMZM2G058612 No alias F-box family protein 0.02 Orthogroups_2024-Update
GRMZM2G139872 No alias F-box family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G024060.1 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Sobic.008G124500.1 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 469 490
IPR001611 Leu-rich_rpt 417 438
IPR001611 Leu-rich_rpt 185 208
No external refs found!