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  5. Seita.3G339200.1

Seita.3G339200.1


Description : Unknown function


Gene families : OG_42_0000093 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.3G339200.1
Cluster HCAA Clusters: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
At3g11930 No alias AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73] 0.03 Orthogroups_2024-Update
PSME_00004500-RA No alias (at1g09740 : 92.4) Adenine nucleotide alpha... 0.02 Orthogroups_2024-Update
Seita.3G221300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen01g026070 No alias Universal stress protein family 0.02 Orthogroups_2024-Update
Sopen09g006490 No alias Universal stress protein family 0.03 Orthogroups_2024-Update
evm.model.contig_2037.2 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006361 transcription initiation from RNA polymerase I promoter IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
MF GO:0140223 general transcription initiation factor activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006016 UspA 19 163
No external refs found!